dipy
__config__alignalign._publicalign.bundleminalign.crosscorralign.expectmaxalign.imaffine
align.imwarpalign.metricsalign.parzenhistalign.reslicealign.scalespacealign.streamlinearalign.sumsqdiffalign.transformsalign.vector_fieldsBunchfloatingAffineMapAffineRegistrationAffineTransform3DCCMetricDiffeomorphicMapEMMetricMutualInformationMetricRigidTransform3DSSDMetricStreamlineLinearRegistrationSymmetricDiffeomorphicRegistrationTranslationTransform3DAffineInvalidValuesErrorAffineInversionErrorAffineMapAffineRegistrationIsotropicScaleSpaceMutualInformationMetricOptimizerParzenJointHistogramScaleSpaceBunchDiffeomorphicMapDiffeomorphicRegistrationScaleSpaceSymmetricDiffeomorphicRegistrationfloatingCCMetricEMMetricSSDMetricSimilarityMetricfloatingParzenJointHistogramIsotropicScaleSpaceScaleSpacefloatingBundleMinDistanceAsymmetricMetricBundleMinDistanceMatrixMetricBundleMinDistanceMetricBundleSumDistanceMatrixMetricOptimizerStreamlineDistanceMetricStreamlineLinearRegistrationStreamlineRegistrationMapStreamlinesAffineTransform2DAffineTransform3DRigidIsoScalingTransform2DRigidIsoScalingTransform3DRigidScalingTransform2DRigidScalingTransform3DRigidTransform2DRigidTransform3DRotationTransform2DRotationTransform3DScalingTransform2DScalingTransform3DTransformTranslationTransform2DTranslationTransform3Dbootscorecore.benchmarkscore.benchmarks.bench_spherecore.geometrycore.gradientscore.graphcore.histeqcore.interpolationcore.ndindexcore.onetime
core.optimizecore.profilecore.rngcore.spherecore.sphere_statscore.subdivide_octahedroncore.waveletTimerGradientTableHemiSphereGraphInterpolatorNearestNeighborInterpolatorOutsideImageTriLinearInterpolatorOneTimePropertyResetMixinNonNegativeLeastSquaresOptimizerSKLearnLinearSolverProfilerHemiSphereSpherepermutationsHemiSpheredatadata.fetcherDataErrorGradientTableHemiSphereSphereFetcherErrortqdmdenoisedenoise.adaptive_soft_matchingdenoise.denspeeddenoise.enhancement_kerneldenoise.gibbsdenoise.localpcadenoise.nlmeansdenoise.nlmeans_blockdenoise.noise_estimatedenoise.non_local_meansdenoise.patch2selfdenoise.pca_noise_estimatedenoise.shift_twist_convolutionEnhancementKernelHemiSphereSphereVersionpartialEnhancementKerneldirectiondirection.bootstrap_direction_getterdirection.closest_peak_direction_getterdirection.peaksdirection.pmfdirection.probabilistic_direction_getterBootDirectionGetterClosestPeakDirectionGetterDeterministicMaximumDirectionGetterEuDXDirectionGetterInTemporaryDirectoryPeaksAndMetricsProbabilisticDirectionGetterSphererepeatBootDirectionGetterBootPmfGenBaseDirectionGetterBasePmfDirectionGetterClosestPeakDirectionGetterPmfGenDirectionGetterEuDXDirectionGetterInTemporaryDirectoryPeaksAndMetricsSphererepeatBootPmfGenPmfGenSHCoeffPmfGenSimplePmfGenDeterministicMaximumDirectionGetterProbabilisticDirectionGetterioio.bvectxtio.dpy
io.gradientsio.imageio.peaksio.picklesio.stateful_tractogramio.streamlineio.utilsio.vtkDpyDpyStreamlinesInTemporaryDirectoryPeaksAndMetricsSphereOriginPerArrayDictPerArraySequenceDictSpaceStatefulTractogramStreamlinesTractogramproductDpyOriginSpaceStatefulTractogramTractogramNifti1Imagenn
reconstreconst.basereconst.benchmarksreconst.benchmarks.bench_bounding_boxreconst.benchmarks.bench_csdreconst.benchmarks.bench_peaksreconst.benchmarks.bench_squashreconst.benchmarks.bench_vec_val_sumreconst.cachereconst.cross_validationreconst.csdeconvreconst.dkireconst.dki_microreconst.dsireconst.dtireconst.eudx_direction_getterreconst.forecastreconst.fwdtireconst.gqireconst.ivimreconst.mapmrireconst.mcsdreconst.msdkireconst.multi_voxelreconst.odfreconst.qtdmrireconst.quick_squashreconst.recspeedreconst.sfmreconst.shm
reconst.shorereconst.utilsreconst.vec_val_sumReconstFitReconstModelConstrainedSphericalDeconvModelGradientTableCacheAxSymShResponseConstrainedSDTModelConstrainedSphericalDeconvModelSphHarmFitSphHarmModelTensorModelDiffusionKurtosisFitDiffusionKurtosisModelReconstModelTensorFitDiffusionKurtosisFitDiffusionKurtosisModelKurtosisMicrostructuralFitKurtosisMicrostructureModelCacheDiffusionSpectrumDeconvFitDiffusionSpectrumDeconvModelDiffusionSpectrumFitDiffusionSpectrumModelOdfFitOdfModelReconstModelTensorFitTensorModelEuDXDirectionGetterCacheForecastFitForecastModelLooseVersionOdfFitOdfModelFreeWaterTensorFitFreeWaterTensorModelReconstModelTensorFitCacheGeneralizedQSamplingFitGeneralizedQSamplingModelOdfFitOdfModelIvimFitIvimModelTRRIvimModelVPLooseVersionReconstModelCacheLooseVersionMapmriFitMapmriModelOptimizerReconstFitReconstModelGradientTableLooseVersionMSDeconvFitMultiShellDeconvModelMultiShellResponseQpFitterTensorModelMeanDiffusionKurtosisFitMeanDiffusionKurtosisModelReconstModelCallableArrayMultiVoxelFitReconstFitOdfFitOdfModelReconstFitReconstModelCacheLooseVersionQtdmriFitQtdmriModelCacheExponentialIsotropicFitExponentialIsotropicModelIsotropicFitIsotropicModelReconstFitReconstModelSparseFascicleFitSparseFascicleModelCacheCsaOdfModelOdfFitOdfModelOpdtModelQballBaseModelQballModelResidualBootstrapWrapperSphHarmFitSphHarmModelCacheLooseVersionShoreFitShoreModelsegmentsegment.benchmarkssegment.benchmarks.bench_quickbundlessegment.bundlessegment.clusteringsegment.clustering_algorithmssegment.clusteringspeedsegment.cythonutilssegment.featurespeedsegment.masksegment.metricsegment.metricspeedsegment.mrfsegment.thresholdsegment.tissueMDFpyMetricQB_NewStreamlinesBundleMinDistanceAsymmetricMetricBundleMinDistanceMetricBundleSumDistanceMatrixMetricRecoBundlesStreamlineLinearRegistrationStreamlineschainABCMetaAveragePointwiseEuclideanMetricClusterClusterCentroidClusterMapClusterMapCentroidClusteringIdentityMetricMinimumAverageDirectFlipMetricQuickBundlesQuickBundlesXResampleFeatureTreeClusterTreeClusterMapClusterCentroidClusterMapCentroidDTYPEClusterCentroidClusterMapCentroidClustersClustersCentroidDTYPEQuickBundlesQuickBundlesXTreeClusterTreeClusterMapArcLengthFeatureCenterOfMassFeatureCythonFeatureFeatureIdentityFeatureMidpointFeatureResampleFeatureVectorOfEndpointsFeatureArcLengthFeatureAveragePointwiseEuclideanMetricCenterOfMassFeatureCosineMetricEuclideanMetricFeatureIdentityFeatureMetricMidpointFeatureMinimumAverageDirectFlipMetricResampleFeatureSumPointwiseEuclideanMetricVectorOfEndpointsFeatureAveragePointwiseEuclideanMetricCosineMetricCythonMetricMetricMinimumAverageDirectFlipMetricSumPointwiseEuclideanMetricConstantObservationModelIteratedConditionalModesConstantObservationModelIteratedConditionalModesTissueClassifierHMRFsimssims.phantomsims.voxelGradientTablestats
trackingtracking._utilstracking.benchmarkstracking.benchmarks.bench_streamlinetracking.direction_gettertracking.distancestracking.fbcmeasurestracking.learningtracking.lifetracking.local_trackingtracking.localtracktracking.meshtracking.metricstracking.propspeedtracking.stopping_criteriontracking.streamlinetracking.streamlinespeedtracking.utils
tracking.vox2trackStreamlinesStreamlinesDirectionGetterEnhancementKernelFBCMeasuresKDTreeinterp1dFiberFitFiberModelLifeSignalMakerReconstFitReconstModelAnatomicalStoppingCriterionIterableLocalTrackingParticleFilteringTrackingStreamlineStatusActStoppingCriterionAnatomicalStoppingCriterionBinaryStoppingCriterionCmcStoppingCriterionStoppingCriterionStreamlineStatusThresholdStoppingCriterionStreamlinesStreamlinesOrderedDictcombinationsdefaultdictgroupbyvizviz.appviz.gmemviz.panelviz.projectionsviz.regtoolsLooseVersionGlobalHorizonHorizonSpaceStatefulTractogramStreamlinesGlobalHorizonGlobalHorizonworkflowsworkflows.alignworkflows.baseworkflows.combined_workflowworkflows.denoiseworkflows.docstring_parserworkflows.flow_runnerworkflows.ioworkflows.maskworkflows.multi_ioworkflows.reconstworkflows.segmentworkflows.statsworkflows.trackingworkflows.vizworkflows.workflowAffineMapAffineRegistrationAffineTransform3DApplyTransformFlowCCMetricDiffeomorphicMapEMMetricImageRegistrationFlowMutualInformationMetricResliceFlowRigidTransform3DSSDMetricSlrWithQbxFlowSymmetricDiffeomorphicRegistrationSynRegistrationFlowTranslationTransform3DWorkflowIntrospectiveArgumentParserNumpyDocStringCombinedWorkflowWorkflowGibbsRingingFlowLPCAFlowMPPCAFlowNLMeansFlowPatch2SelfFlowWorkflowNumpyDocStringReaderIntrospectiveArgumentParserFetchFlowIoInfoFlowSplitFlowWorkflowMaskFlowWorkflowIOIteratorConstrainedSphericalDeconvModelCsaOdfModelDiffusionKurtosisModelReconstCSAFlowReconstCSDFlowReconstDkiFlowReconstDtiFlowReconstIvimFlowReconstMAPMRIFlowTensorModelWorkflowLabelsBundlesFlowMedianOtsuFlowRecoBundlesRecoBundlesFlowSpaceStatefulTractogramStreamlinesWorkflowBundleAnalysisTractometryFlowBundleShapeAnalysisLinearMixedModelsFlowSNRinCCFlowSpaceStatefulTractogramTensorModelWorkflowBinaryStoppingCriterionClosestPeakDirectionGetterCmcStoppingCriterionDeterministicMaximumDirectionGetterLocalFiberTrackingPAMFlowLocalTrackingPFTrackingPAMFlowParticleFilteringTrackingProbabilisticDirectionGetterSpaceStatefulTractogramThresholdStoppingCriterionWorkflowHorizonFlowWorkflowWorkflow