DIPY WORKSHOP

Online Edition

15th - 19th March 2021

Bloomington - Indiana

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Eleftherios Garyfallidis

Eleftherios Garyfallidis

Chair, DIPY Founder & Lead Developer

Indiana University

Ariel Rokem

Ariel Rokem

Associate DIPY Lead

eScience Institute, University of Washington, Seattle

Maxime Descoteaux

Maxime Descoteaux

DIPY Scientific Advisor

University of Sherbrooke, QC, CA

Jennifer A McNab

Jennifer A Mcnab

Department of Radiology, Stanford University, Stanford, California, USA

Gabriel Girard

Gabriel Girard

CIBM & CHUV & EPFL

Lausanne, CH

Susie Yi Huang,

Susie Yi Huang,

Department of Radiology, Massachusetts General Hospital, Boston, USA

Jaroslaw Harezlak

Jaroslaw Harezlak

DIPY Advisor on Statistics

Indiana University

Eduardo Castro

Eduardo Castro

Healthcare and Life Sciences Research

IBM T.J. Watson Research Center

Rafael Neto Henriques

Rafael Neto Henriques

Champalimaud Research

Champalimaud Centre for the Unknown, PT

Wei Tang

Wei Tang

Indiana University

Hu Cheng

Hu Cheng

Psychological and Brain Sciences

Indiana University

Alonso Ramirez Manzanares

Alonso Ramirez Manzanares

CIMAT

Julio Villalon

Julio Villalon

Imaging Genetics Center, Institute for Neuro Imaging and Informatics, USC

Gregory R. Lee

Gregory R. Lee

Quansight

Daniel Moyer

Daniel Moyer

CSAIL, Massachusetts Institute of Technology, MA

François Rheault

François Rheault

Vanderbilt University

Etienne St-Onge

Etienne St-Onge

McGill University

Jon Haitz Legarreta Gorroño

Jon Haitz Legarreta Gorroño

University of Sherbrooke Connectivity Imaging Lab

Serge Koudoro

Serge Koudoro

DIPY Release Manager

Indiana University

Shreyas Fadnavis

Shreyas Fadnavis

Indiana University

Bramsh Qamar Chandio

Bramsh Qamar Chandio

Indiana University

Javier Guaje

Javier Guaje

Indiana University

Jong Sung Park

Jong Sung Park

Indiana University

Day 1 - Monday, March 15

  • 11:00 AM - Ask me Anything on DTI, DKI, Denoising, Preprocessing

    Javier GuajeJavier Guaje Shreyas FadnavisShreyas Fadnavis Eleftherios GaryfallidisEleftherios Garyfallidis Wei TangWei Tang Bennett LandmanBennett Landman Ariel RokemAriel Rokem Rafael Neto HenriquesRafael Neto Henriques

  • 6:00 AM - Overview & Introduction to new Interfaces

    Eleftherios GaryfallidisEleftherios Garyfallidis Javier GuajeJavier Guaje

  • 6:00 AM - Introduction to computational anatomy

    François RheaultFrançois Rheault Wei TangWei Tang

  • 6:00 AM - Diffusion Tensor Imaging and Diffusion Kurtosis Imaging

    Rafael Neto HenriquesRafael Neto Henriques Ariel RokemAriel Rokem

  • 6:00 AM - Denoising

    Shreyas FadnavisShreyas Fadnavis

Day 2 - Tuesday, March 16

  • 11:00 AM - Ask me anything on Reconstruction Model, Microstructure and image Registration

    Eleftherios GaryfallidisEleftherios Garyfallidis Leevi KerkeläLeevi Kerkelä Maxime DescoteauxMaxime Descoteaux Tom Dela HaijeTom Dela Haije Kenji MarshallKenji Marshall Erick Jorge Canales-RodríguezErick Jorge Canales-Rodríguez Rafael Neto HenriquesRafael Neto Henriques

  • 6:00 AM - A tour of spherical harmonics-based local reconstruction techniques in DIPY

    Maxime DescoteauxMaxime Descoteaux

  • 6:00 AM - Microstructure modeling and beyond

    Rafael Neto HenriquesRafael Neto Henriques

  • 6:00 AM - Dictionary based methods for brain microstructure estimation

    Alonso Ramirez ManzanaresAlonso Ramirez Manzanares

  • 6:00 AM - Motion Correction & Image Registration

    Serge KoudoroSerge Koudoro

Day 3 - Wednesday, March 17

  • 11:00 AM - Ask me Anything on Tractography, Deep Learning and Multi-dimmensionnal Encoding

    Gabriel GirardGabriel Girard Shreyas FadnavisShreyas Fadnavis Bramsh Qamar ChandioBramsh Qamar Chandio Javier GuajeJavier Guaje Jennifer A McNabJennifer A McNab Jong Sung ParkJong Sung Park Jon Haitz Legarreta GorroñoJon Haitz Legarreta Gorroño

  • 6:00 AM - Diffusion Tractography and Connectivity

    Gabriel GirardGabriel Girard Etienne St-OngeEtienne St-Onge

  • 6:00 AM - Multidimensional Diffusion Encodings

    Jennifer A McNabJennifer A McNab

  • 6:00 AM - Deep Learning in Medical Imaging (Intro, Segmentation, Registration)

    Bramsh Qamar ChandioBramsh Qamar Chandio Jon Haitz Legarreta GorroñoJon Haitz Legarreta Gorroño Javier GuajeJavier Guaje Shreyas FadnavisShreyas Fadnavis Jong Sung ParkJong Sung Park

Day 4 - Thursday, March 18

  • 11:00 AM - Ask me Anything on Bundles, Tractometry, Stats, Tissue

    Julio VillalonJulio Villalon Hu ChengHu Cheng Bramsh Qamar ChandioBramsh Qamar Chandio Jaroslaw HarezlakJaroslaw Harezlak Kurt G SchillingKurt G Schilling Eleftherios GaryfallidisEleftherios Garyfallidis

  • 6:00 AM - Automatic segmentation of bundles

    Eleftherios GaryfallidisEleftherios Garyfallidis

  • 6:00 AM - Tractometry

    Bramsh Qamar ChandioBramsh Qamar Chandio

  • 6:00 AM - Statistical analysis and group analysis

    Jaroslaw HarezlakJaroslaw Harezlak

  • 6:00 AM - Advances in diffusion MRI acquisition and Connectome 2.0

    Susie Yi Huang,Susie Yi Huang,

  • 6:00 AM - Tissue classification

    Julio VillalonJulio Villalon Hu ChengHu Cheng

Day 5 - Friday, March 19

  • 11:00 AM - Ask me Anything on IVIM, Data Harmonization, AFQ, Predictive Modeling

    Ariel RokemAriel Rokem Eduardo CastroEduardo Castro Gregory R. LeeGregory R. Lee Daniel MoyerDaniel Moyer Shreyas FadnavisShreyas Fadnavis

  • 6:00 AM - IVIM and Optimization

    Shreyas FadnavisShreyas Fadnavis

  • 6:00 AM - Data harmonization

    Daniel MoyerDaniel Moyer

  • 6:00 AM - Tractometry II

    Ariel RokemAriel Rokem

  • 6:00 AM - GPU Acceleration

    Gregory R. LeeGregory R. Lee

  • 6:00 AM - Clinical Insights from Brain Imaging using Predictive Modeling: Huntington’s Disease as a Case Study

    Eduardo CastroEduardo Castro

The workshop will include a data accelerator where you will be able to analyze your own data together with the DIPY developers. A Scientific Q/A sessions will be available everyday. More information provied after registration. The workshop is open to academic, clinical and industrial attendees from all fields of neuroscience and neuroengineering.

Registration for DIPY WORKSHOP 2021 is closed.

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Access to all materials : Yes

Duration : 5 Days

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